Package: SplitKnockoff 1.1

Haoxue Wang

SplitKnockoff: Split Knockoffs for Structural Sparsity

Split Knockoff is a data adaptive variable selection framework for controlling the (directional) false discovery rate (FDR) in structural sparsity, where variable selection on linear transformation of parameters is of concern. This proposed scheme relaxes the linear subspace constraint to its neighborhood, often known as variable splitting in optimization. Simulation experiments can be reproduced following the Vignette. We include data (both .mat and .csv format) and application with our method of Alzheimer's Disease study in this package. 'Split Knockoffs' is first defined in Cao et al. (2021) <arxiv:2103.16159>.

Authors:Haoxue Wang [aut, cre], Yang Cao [aut], Xinwei Sun [aut], Yuan Yao [aut]

SplitKnockoff_1.1.tar.gz
SplitKnockoff_1.1.zip(r-4.5)SplitKnockoff_1.1.zip(r-4.4)SplitKnockoff_1.1.zip(r-4.3)
SplitKnockoff_1.1.tgz(r-4.4-any)SplitKnockoff_1.1.tgz(r-4.3-any)
SplitKnockoff_1.1.tar.gz(r-4.5-noble)SplitKnockoff_1.1.tar.gz(r-4.4-noble)
SplitKnockoff_1.1.tgz(r-4.4-emscripten)SplitKnockoff_1.1.tgz(r-4.3-emscripten)
SplitKnockoff.pdf |SplitKnockoff.html
SplitKnockoff/json (API)

# Install 'SplitKnockoff' in R:
install.packages('SplitKnockoff', repos = c('https://wanghaoxue0.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/wanghaoxue0/splitknockoff/issues

On CRAN:

4.18 score 3 stars 4 scripts 269 downloads 11 exports 41 dependencies

Last updated 3 years agofrom:259761699f. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 21 2024
R-4.5-winOKNov 21 2024
R-4.5-linuxOKNov 21 2024
R-4.4-winOKNov 21 2024
R-4.4-macOKNov 21 2024
R-4.3-winOKNov 21 2024
R-4.3-macOKNov 21 2024

Exports:canonicalSVDhittingpointnormcsimu_evalsimu_unitsk.createsk.decomposesk.filtersk.selectW_signW_support

Dependencies:clicodetoolscolorspacefansifarverforeachggplot2glmnetgluegtableisobanditeratorslabelinglatex2explatticelifecyclemagrittrMASSMatrixmgcvmunsellmvtnormnlmepillarpkgconfigR6RColorBrewerRcppRcppEigenrlangRSpectrascalesshapestringistringrsurvivaltibbleutf8vctrsviridisLitewithr

Splitknockoff

Rendered fromSplitknockoff.Rmdusingknitr::rmarkdownon Nov 21 2024.

Last update: 2022-02-21
Started: 2022-02-21