Package: SplitKnockoff 1.1

Haoxue Wang

SplitKnockoff: Split Knockoffs for Structural Sparsity

Split Knockoff is a data adaptive variable selection framework for controlling the (directional) false discovery rate (FDR) in structural sparsity, where variable selection on linear transformation of parameters is of concern. This proposed scheme relaxes the linear subspace constraint to its neighborhood, often known as variable splitting in optimization. Simulation experiments can be reproduced following the Vignette. We include data (both .mat and .csv format) and application with our method of Alzheimer's Disease study in this package. 'Split Knockoffs' is first defined in Cao et al. (2021) <arxiv:2103.16159>.

Authors:Haoxue Wang [aut, cre], Yang Cao [aut], Xinwei Sun [aut], Yuan Yao [aut]

SplitKnockoff_1.1.tar.gz
SplitKnockoff_1.1.zip(r-4.5)SplitKnockoff_1.1.zip(r-4.4)SplitKnockoff_1.1.zip(r-4.3)
SplitKnockoff_1.1.tgz(r-4.5-any)SplitKnockoff_1.1.tgz(r-4.4-any)SplitKnockoff_1.1.tgz(r-4.3-any)
SplitKnockoff_1.1.tar.gz(r-4.5-noble)SplitKnockoff_1.1.tar.gz(r-4.4-noble)
SplitKnockoff_1.1.tgz(r-4.4-emscripten)SplitKnockoff_1.1.tgz(r-4.3-emscripten)
SplitKnockoff.pdf |SplitKnockoff.html
SplitKnockoff/json (API)

# Install 'SplitKnockoff' in R:
install.packages('SplitKnockoff', repos = c('https://wanghaoxue0.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/wanghaoxue0/splitknockoff/issues

On CRAN:

4.18 score 3 stars 4 scripts 278 downloads 11 exports 41 dependencies

Last updated 3 years agofrom:259761699f. Checks:8 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 19 2025
R-4.5-winOKFeb 19 2025
R-4.5-macOKFeb 19 2025
R-4.5-linuxOKFeb 19 2025
R-4.4-winOKFeb 19 2025
R-4.4-macOKFeb 19 2025
R-4.3-winOKFeb 19 2025
R-4.3-macOKFeb 19 2025

Exports:canonicalSVDhittingpointnormcsimu_evalsimu_unitsk.createsk.decomposesk.filtersk.selectW_signW_support

Dependencies:clicodetoolscolorspacefansifarverforeachggplot2glmnetgluegtableisobanditeratorslabelinglatex2explatticelifecyclemagrittrMASSMatrixmgcvmunsellmvtnormnlmepillarpkgconfigR6RColorBrewerRcppRcppEigenrlangRSpectrascalesshapestringistringrsurvivaltibbleutf8vctrsviridisLitewithr

Splitknockoff

Rendered fromSplitknockoff.Rmdusingknitr::rmarkdownon Feb 19 2025.

Last update: 2022-02-21
Started: 2022-02-21